CDS

Accession Number TCMCG007C52623
gbkey CDS
Protein Id XP_009112332.2
Location complement(join(5352182..5352322,5352447..5352567,5352677..5352746,5352838..5353008,5353116..5353290,5353397..5353584,5353705..5353848,5353940..5354003,5354089..5354181,5354268..5354353,5354432..5354572,5354669..5354815,5354906..5354993,5355073..5355234,5355373..5355468))
Gene LOC103837712
GeneID 103837712
Organism Brassica rapa

Protein

Length 628aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009114084.2
Definition succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial isoform X1 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category C
Description Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q)
KEGG_TC -
KEGG_Module M00009        [VIEW IN KEGG]
M00011        [VIEW IN KEGG]
M00148        [VIEW IN KEGG]
KEGG_Reaction R02164        [VIEW IN KEGG]
KEGG_rclass RC00045        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K00234        [VIEW IN KEGG]
EC 1.3.5.1        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00020        [VIEW IN KEGG]
ko00190        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
ko01120        [VIEW IN KEGG]
ko01130        [VIEW IN KEGG]
ko01200        [VIEW IN KEGG]
ko04714        [VIEW IN KEGG]
ko04932        [VIEW IN KEGG]
ko05010        [VIEW IN KEGG]
ko05012        [VIEW IN KEGG]
ko05016        [VIEW IN KEGG]
map00020        [VIEW IN KEGG]
map00190        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
map01120        [VIEW IN KEGG]
map01130        [VIEW IN KEGG]
map01200        [VIEW IN KEGG]
map04714        [VIEW IN KEGG]
map04932        [VIEW IN KEGG]
map05010        [VIEW IN KEGG]
map05012        [VIEW IN KEGG]
map05016        [VIEW IN KEGG]
GOs GO:0000104        [VIEW IN EMBL-EBI]
GO:0000166        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005524        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005618        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0005740        [VIEW IN EMBL-EBI]
GO:0005743        [VIEW IN EMBL-EBI]
GO:0005746        [VIEW IN EMBL-EBI]
GO:0005749        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006091        [VIEW IN EMBL-EBI]
GO:0006099        [VIEW IN EMBL-EBI]
GO:0006101        [VIEW IN EMBL-EBI]
GO:0006119        [VIEW IN EMBL-EBI]
GO:0006121        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006163        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006753        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008144        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009055        [VIEW IN EMBL-EBI]
GO:0009060        [VIEW IN EMBL-EBI]
GO:0009061        [VIEW IN EMBL-EBI]
GO:0009117        [VIEW IN EMBL-EBI]
GO:0009123        [VIEW IN EMBL-EBI]
GO:0009126        [VIEW IN EMBL-EBI]
GO:0009141        [VIEW IN EMBL-EBI]
GO:0009144        [VIEW IN EMBL-EBI]
GO:0009150        [VIEW IN EMBL-EBI]
GO:0009161        [VIEW IN EMBL-EBI]
GO:0009167        [VIEW IN EMBL-EBI]
GO:0009199        [VIEW IN EMBL-EBI]
GO:0009205        [VIEW IN EMBL-EBI]
GO:0009259        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0015980        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016310        [VIEW IN EMBL-EBI]
GO:0016491        [VIEW IN EMBL-EBI]
GO:0016627        [VIEW IN EMBL-EBI]
GO:0016999        [VIEW IN EMBL-EBI]
GO:0017076        [VIEW IN EMBL-EBI]
GO:0017144        [VIEW IN EMBL-EBI]
GO:0019637        [VIEW IN EMBL-EBI]
GO:0019693        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0019866        [VIEW IN EMBL-EBI]
GO:0022900        [VIEW IN EMBL-EBI]
GO:0022904        [VIEW IN EMBL-EBI]
GO:0030312        [VIEW IN EMBL-EBI]
GO:0030554        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031966        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0032553        [VIEW IN EMBL-EBI]
GO:0032555        [VIEW IN EMBL-EBI]
GO:0032559        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035639        [VIEW IN EMBL-EBI]
GO:0036094        [VIEW IN EMBL-EBI]
GO:0042773        [VIEW IN EMBL-EBI]
GO:0042775        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043168        [VIEW IN EMBL-EBI]
GO:0043169        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044429        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044455        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045257        [VIEW IN EMBL-EBI]
GO:0045273        [VIEW IN EMBL-EBI]
GO:0045281        [VIEW IN EMBL-EBI]
GO:0045283        [VIEW IN EMBL-EBI]
GO:0045333        [VIEW IN EMBL-EBI]
GO:0046034        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046872        [VIEW IN EMBL-EBI]
GO:0046914        [VIEW IN EMBL-EBI]
GO:0050897        [VIEW IN EMBL-EBI]
GO:0055086        [VIEW IN EMBL-EBI]
GO:0055114        [VIEW IN EMBL-EBI]
GO:0070469        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0072350        [VIEW IN EMBL-EBI]
GO:0072521        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097367        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]
GO:0098798        [VIEW IN EMBL-EBI]
GO:0098800        [VIEW IN EMBL-EBI]
GO:0098803        [VIEW IN EMBL-EBI]
GO:1901135        [VIEW IN EMBL-EBI]
GO:1901265        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990204        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTGGCGCTGCGTCTCTCGTAGCCTCCGAGCTCCTTCATCAAGGACCTCACTCTCTGGATCTCGCTTTTCTAGATTCTTCTCCTCCTCCTCCTCTCAGACGGGTGATTACACGATAGTGGATCACACCTATGACGCGGTCGTTGTTGGAGCTGGTGGTGCTGGCCTCAGGGCGGCCATTGGATTATCCGAGCATGGCTTTAACACCGCTTGCATTACCAAGCTTTTCCCCACCCGCTCCCATACCGTCGCTGCTCAGGGTGGTATAAACGCTGCACTGGGAAACATGTCTGAAGATGATTGGAGATGGCACATGTATGATACTGTTAAAGGCAGTGACTGGCTTGGTGATCAAGATGCTATCCAGTACATGTGTAGAGAGGCACCAAAAGCAGTGATTGAACTTGAGAACTACGGCCTTCCTTTTTCCCGTACTGAAGAGGGTAAAATCTACCAGCGTGCCTTTGGTGGTCAGAGTCTCGACTTTGGCAAAGGTGGTCAGGCCTATCGTTGTGCTTGCGCTGCTGATCGGACTGGACATGCTCTCTTGCATACCCTATATGGACAAGCTATGAAGCATAACACACAGTTCTTTGTTGAATACTTCGCTCTGGATTTGCTCATGGCTAGTGATGGTACTTGCCAGGGTGTAATTGCACTAAACATGGAAGACGGAACACTGCATCGTTTCCGCTCTGCACAAACAATTTTGGCCACTGGGGGTTATGGCAGAGCATACTTCTCAGCAACCTCAGCACATACTTGCACAGGAGATGGCAATGCCATGGTTGCACGTGCCGGTCTTCCACTCCAGGACTTGGAGTTTGTTCAGTTCCACCCAACTGGTATATATGGAGCCGGATGTCTCATCACTGAAGGATCTCGAGGTGAAGGTGGGATCCTTAGAAATAGTGAAGGTGAACGTTTTATGGAACGATATGCTCCAACTGCCAAGGATCTTGCATCAAGAGATGTTGTCTCCAGATCTATGACTATGGAAATCAGGGAAGGTCGTGGTGTAGGGCCGCATAAGGATCATATCTATCTCCATTTGAATCATCTTCCACCAGAAGTTCTGAAAGAAAGGCTTCCTGGAATCTCTGAGACAGCTGCAATCTTTGCTGGTGTTGACGTTACCAAAGAGCCAATTCCAGTTTTGCCCACTGTCCACTACAACATGGGTGGTATTCCAACAAATTACCACGGCGAGGTAGTGACCATAAAAGGAGATGATCCAGATGCAGTGGTTCCTGGGCTTATGGCTGCTGGGGAGGCAGCTTGTGCATCTGTTCATGGTGCCAACAGGCTTGGTGCAAATTCTCTCCTCGATATTGTTGTGTTCGGCCGTGCTTGTGCAAATAGGGTTGCAGAGATAAGCAAACCAGGTGAGAAACAGAGACCTCTAGAGGAGAATGCAGGTAAGAAGACGATCGAATGGCTGAACAAGTTAAGACACTCAAGCGGGTCGCTTCCTACATCAAGTATCAGATTGAACATGCAGAGGATTATGCAGAACAATGCAGCTGTCTTCCGCACCCAAGAAACACTGGAAGAAGGTTGTCAGTTGATCGACAAGGCATGGGAAAGTTTCGAGGATGTCCAGGTTAAAGATCGGAGTTTGATATGGAACTCTGATCTGATAGAGACAATAGAGTTGGAGAACCTTCTGATAAACGCGTCCATAACAATGCATTCAGCGGAAGCACGAAAGGAAAGCAGAGGAGCACATGCTCGGGAGGATTTCACGAAAAGGGAGGATGGAGAATGGATGAAGCATACATTGGGGTACTGGGAAGATGAGAAAGTGAGGTTGGAGTATAGGCCTGTTCACATGGACACTCTCGACGATGAGATTGAGACTTTCCCTCCCAAAGCTCGCGTCTATTGA
Protein:  
MWRCVSRSLRAPSSRTSLSGSRFSRFFSSSSSQTGDYTIVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMSEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEEGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMASDGTCQGVIALNMEDGTLHRFRSAQTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPHKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVVTIKGDDPDAVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEISKPGEKQRPLEENAGKKTIEWLNKLRHSSGSLPTSSIRLNMQRIMQNNAAVFRTQETLEEGCQLIDKAWESFEDVQVKDRSLIWNSDLIETIELENLLINASITMHSAEARKESRGAHAREDFTKREDGEWMKHTLGYWEDEKVRLEYRPVHMDTLDDEIETFPPKARVY